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Commit d51a665d authored by Kirill Terekhov's avatar Kirill Terekhov
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Many fixes and updates for model composition

parent 99ffb295
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.gitignore
View file @ d51a665d
......@@ -12,3 +12,5 @@ Source/Solver/solver_fcbiilu2/fcbiilu2.cpp
Source/Solver/solver_k3biilu2/k3d.cpp
Source/Solver/solver_k3biilu2/k3d.h
.vscode/*
CMakeLists.txt
View file @ d51a665d
......@@ -265,6 +265,9 @@ endif(COMPILE_TESTS)
set(INMOST_INSTALL_HEADERS Source/Headers/inmost.h
Source/Headers/inmost_autodiff.h
Source/Headers/inmost_residual.h
Source/Headers/inmost_model.h
Source/Headers/inmost_operator.h
Source/Headers/inmost_common.h
Source/Headers/inmost_data.h
Source/Headers/inmost_dense.h
......@@ -276,6 +279,7 @@ set(INMOST_INSTALL_HEADERS Source/Headers/inmost.h
Source/Headers/inmost_sparse.h
Source/Headers/inmost_xml.h
Source/Headers/inmost_variable.h
Source/Headers/inmost_block_variable.h
Source/Headers/container.hpp)
......@@ -295,6 +299,9 @@ set_property(TARGET inmost PROPERTY PUBLIC_HEADER
"${PROJECT_BINARY_DIR}/inmost_options.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_autodiff.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_residual.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_operator.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_model.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_common.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_data.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_dense.h"
......@@ -305,6 +312,7 @@ set_property(TARGET inmost PROPERTY PUBLIC_HEADER
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_solver.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_sparse.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_variable.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_block_variable.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/inmost_xml.h"
"${PROJECT_SOURCE_DIR}/Source/Headers/container.hpp")
......
Examples/DrawMatrix/main.cpp
View file @ d51a665d
......@@ -420,7 +420,7 @@ void draw()
glBegin(GL_QUADS);
for(Sparse::Matrix::iterator it = m->Begin(); it != m->End(); ++it)
for(Sparse::Row::iterator jt = it->Begin(); jt != it->End(); ++jt)
if( jt->first != it - m->Begin() )
if( jt->first != it - m->Begin() && jt->second)
//DrawEntry(ord->position((it - m->Begin())), m->Size() - ord->position(jt->first));//, sqrt((jt->second-min)/(max-min)));
DrawEntry(jt->first, m->Size() - (it - m->Begin()));//, sqrt((jt->second-min)/(max-min)));
glEnd();
......@@ -451,17 +451,17 @@ void draw()
}
glEnd();
zoom += 1;
//zoom += 1;
glColor3f(1.0, 0, 0);
glBegin(GL_QUADS);
for (Sparse::Matrix::iterator it = m->Begin(); it != m->End(); ++it)
{
int ind = it - m->Begin();
if (fabs((*it)[ind]) < 1e-9) //DrawEntry(ord->position((it - m->Begin())), m->Size() - ord->position(ind));
if (fabs((*it)[ind]) < 1e-13) //DrawEntry(ord->position((it - m->Begin())), m->Size() - ord->position(ind));
DrawEntry((it - m->Begin()), m->Size() - ind);
}
glEnd();
zoom -= 1;
//zoom -= 1;
if (CommonInput != NULL)
{
......
Examples/GridTools/CMakeLists.txt
View file @ d51a665d
......@@ -9,6 +9,10 @@ add_executable(SliceFunc slice_func.cpp)
add_executable(SplitNonplanar split_nonplanar.cpp)
add_executable(CollapseDegenerate collapse_degenerate.cpp)
add_executable(Bnd2Stl bnd2stl.cpp)
add_executable(Sector sector.cpp)
add_executable(Sew sew.cpp)
add_executable(Scale scale.cpp)
add_executable(Move move.cpp)
target_link_libraries(FixFaults inmost)
if(USE_MPI)
......@@ -106,4 +110,44 @@ if(USE_MPI)
endif(USE_MPI)
install(TARGETS Bnd2Stl EXPORT inmost-targets RUNTIME DESTINATION bin)
target_link_libraries(Sector inmost)
if(USE_MPI)
message("linking Sector with MPI")
target_link_libraries(Sector ${MPI_LIBRARIES})
if(MPI_LINK_FLAGS)
set_target_properties(Sector PROPERTIES LINK_FLAGS "${MPI_LINK_FLAGS}")
endif()
endif(USE_MPI)
install(TARGETS Sector EXPORT inmost-targets RUNTIME DESTINATION bin)
target_link_libraries(Sew inmost)
if(USE_MPI)
message("linking Sew with MPI")
target_link_libraries(Sew ${MPI_LIBRARIES})
if(MPI_LINK_FLAGS)
set_target_properties(Sew PROPERTIES LINK_FLAGS "${MPI_LINK_FLAGS}")
endif()
endif(USE_MPI)
install(TARGETS Sew EXPORT inmost-targets RUNTIME DESTINATION bin)
target_link_libraries(Scale inmost)
if(USE_MPI)
message("linking Scale with MPI")
target_link_libraries(Scale ${MPI_LIBRARIES})
if(MPI_LINK_FLAGS)
set_target_properties(Scale PROPERTIES LINK_FLAGS "${MPI_LINK_FLAGS}")
endif()
endif(USE_MPI)
install(TARGETS Scale EXPORT inmost-targets RUNTIME DESTINATION bin)
target_link_libraries(Move inmost)
if(USE_MPI)
message("linking Move with MPI")
target_link_libraries(Move ${MPI_LIBRARIES})
if(MPI_LINK_FLAGS)
set_target_properties(Move PROPERTIES LINK_FLAGS "${MPI_LINK_FLAGS}")
endif()
endif(USE_MPI)
install(TARGETS Move EXPORT inmost-targets RUNTIME DESTINATION bin)
Examples/GridTools/move.cpp 0 → 100644
View file @ d51a665d
#include <stdio.h>
#include "inmost.h"
using namespace INMOST;
typedef Storage::real real;
typedef Storage::real_array real_array;
int main(int argc, char ** argv)
{
if( argc < 2 )
{
printf("Usage: %s input_mesh [move_x=1] [move_y=1] [move_z=1] [output_mesh]\n",argv[0]);
return -1;
}
Mesh m;
m.Load(argv[1]);
double mx = argc > 2 ? atof(argv[2]) : 1;
double my = argc > 3 ? atof(argv[3]) : 1;
double mz = argc > 4 ? atof(argv[4]) : 1;
std::string save_file = argc > 5 ? std::string(argv[5]) : "out.vtk";
double xmax = -1.0e20, xmin = 1.0e20;
double ymax = -1.0e20, ymin = 1.0e20;
double zmax = -1.0e20, zmin = 1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], y = n->Coords()[1], z = n->Coords()[2];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
if( z > zmax ) zmax = z;
if( z < zmin ) zmin = z;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
std::cout << "z: " << zmin << ":" << zmax << std::endl;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
n->Coords()[0] += mx;
n->Coords()[1] += my;
n->Coords()[2] += mz;
}
xmax = -1.0e20, xmin = 1.0e20;
ymax = -1.0e20, ymin = 1.0e20;
zmax = -1.0e20, zmin = 1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], y = n->Coords()[1], z = n->Coords()[2];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
if( z > zmax ) zmax = z;
if( z < zmin ) zmin = z;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
std::cout << "z: " << zmin << ":" << zmax << std::endl;
std::cout << "Save to " << save_file << std::endl;
m.Save(save_file);
return 0;
}
Examples/GridTools/scale.cpp 0 → 100644
View file @ d51a665d
#include <stdio.h>
#include "inmost.h"
using namespace INMOST;
typedef Storage::real real;
typedef Storage::real_array real_array;
int main(int argc, char ** argv)
{
if( argc < 2 )
{
printf("Usage: %s input_mesh [scale_x=1] [scale_y=1] [scale_z=1] [output_mesh]\n",argv[0]);
return -1;
}
Mesh m;
m.Load(argv[1]);
double sx = argc > 2 ? atof(argv[2]) : 1;
double sy = argc > 3 ? atof(argv[3]) : 1;
double sz = argc > 4 ? atof(argv[4]) : 1;
std::string save_file = argc > 5 ? std::string(argv[5]) : "out.vtk";
double xmax = -1.0e20, xmin = 1.0e20;
double ymax = -1.0e20, ymin = 1.0e20;
double zmax = -1.0e20, zmin = 1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], y = n->Coords()[1], z = n->Coords()[2];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
if( z > zmax ) zmax = z;
if( z < zmin ) zmin = z;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
std::cout << "z: " << zmin << ":" << zmax << std::endl;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
n->Coords()[0] *= sx;
n->Coords()[1] *= sy;
n->Coords()[2] *= sz;
}
xmax = -1.0e20, xmin = 1.0e20;
ymax = -1.0e20, ymin = 1.0e20;
zmax = -1.0e20, zmin = 1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], y = n->Coords()[1], z = n->Coords()[2];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
if( z > zmax ) zmax = z;
if( z < zmin ) zmin = z;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
std::cout << "z: " << zmin << ":" << zmax << std::endl;
std::cout << "Save to " << save_file << std::endl;
m.Save(save_file);
return 0;
}
Examples/GridTools/sector.cpp 0 → 100644
View file @ d51a665d
#include <stdio.h>
#include "inmost.h"
using namespace INMOST;
typedef Storage::real real;
typedef Storage::real_array real_array;
int main(int argc, char ** argv)
{
if( argc < 2 )
{
printf("Usage: %s input_mesh [rotation_angle=0 degrees] [output_mesh]\n",argv[0]);
return -1;
}
Mesh m;
m.Load(argv[1]);
const double pi = 3.1415926536;
double theta = 0, ct, st;
if( argc > 2 ) theta = atof(argv[2])/180.0*pi;
ct = cos(theta);
st = sin(theta);
double xmin = 1.0e20, xmax = -1.0e20;
double ymin = 1.0e20, ymax = -1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0];
double y = n->Coords()[1];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], mx = x;
double y = n->Coords()[1], my = y;
double alpha = pi/4*(2*y-1);
mx += 1 - x*(1-cos(alpha)) + x*cos(2*alpha)*0.2;
my += x*sin(alpha);
n->Coords()[0] = (mx-0.5)*ct - (my-0.5)*st + 0.5;
n->Coords()[1] = (mx-0.5)*st + (my-0.5)*ct + 0.5;
}
xmin = 1.0e20, xmax = -1.0e20;
ymin = 1.0e20, ymax = -1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0];
double y = n->Coords()[1];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
if( argc > 3 )
{
std::cout << "Save to " << argv[3] << std::endl;
m.Save(argv[3]);
}
else
{
std::cout << "Save to out.vtk" << std::endl;
m.Save("out.vtk");
}
return 0;
}
Examples/GridTools/sew.cpp 0 → 100644
View file @ d51a665d
#include <stdio.h>
#include "inmost.h"
using namespace INMOST;
typedef Storage::real real;
typedef Storage::real_array real_array;
int main(int argc, char ** argv)
{
if( argc < 2 )
{
printf("Usage: %s input_mesh1 [input_mesh2] ... [output_mesh]\n",argv[0]);
return -1;
}
Mesh m;
for(int k = 1 ; k < argc; ++k)
m.Load(argv[k]);
double xmax = -1.0e20, xmin = 1.0e20;
double ymax = -1.0e20, ymin = 1.0e20;
double zmax = -1.0e20, zmin = 1.0e20;
for(Mesh::iteratorNode n = m.BeginNode(); n != m.EndNode(); ++n)
{
double x = n->Coords()[0], y = n->Coords()[1], z = n->Coords()[2];
if( x > xmax ) xmax = x;
if( x < xmin ) xmin = x;
if( y > ymax ) ymax = y;
if( y < ymin ) ymin = y;
if( z > zmax ) zmax = z;
if( z < zmin ) zmin = z;
}
std::cout << "x: " << xmin << ":" << xmax << std::endl;
std::cout << "y: " << ymin << ":" << ymax << std::endl;
std::cout << "z: " << zmin << ":" << zmax << std::endl;
std::cout << "Save to out.pmf" << std::endl;
m.Save("out.pmf");
return 0;
}
Examples/GridTools/slice_func.cpp
View file @ d51a665d
......@@ -34,6 +34,10 @@ double func(double x, double y, double z, int n)
if (y < Ly) return y - Ly;
return fmin( fmin(x-Lx,Rx-x), fmin(y-Ly, Ry-y) );
}
else if( n == 6 )
{
return std::min(std::min(sqrt((x-0.48)*(x-0.48) + (z-1)*(z-1))-0.25,sqrt((y-0.53)*(y-0.53) + (z-3)*(z-3))-0.24),sqrt((x-0.6)*(x-0.6) + (z-5)*(z-5))-0.3);
}
return 1;
}
......@@ -1057,7 +1061,7 @@ int main(int argc, char ** argv)
nvv++;
}
vv /= nvv;
if( v < vv*0.15 )
if( v < vv*0.01 )
{
if( false )
{
......@@ -1117,7 +1121,7 @@ int main(int argc, char ** argv)
}
for(Mesh::iteratorCell it = m.BeginCell(); it != m.EndCell(); ++it)
if( material[*it] == 0 )
if( material[*it] == 0 || it->Integer(collapse) )
it->Delete();
for(ElementType etype = FACE; etype >= NODE; etype = PrevElementType(etype) )
......@@ -1130,4 +1134,4 @@ int main(int argc, char ** argv)
m.ReleaseMarker(mrk,EDGE|FACE|NODE);
m.Save(grid_out);
return 0;
}
\ No newline at end of file
}
Examples/OldDrawGrid/CMakeLists.txt
View file @ d51a665d
......@@ -29,7 +29,9 @@ set(SOURCE main.cpp
picker.h
picker.cpp
clipper.h
clipper.cpp)
clipper.cpp
vector.h
vector.cpp)
find_package(OpenGL)
find_package(GLUT)
......
Examples/OldDrawGrid/clipboard.cpp
View file @ d51a665d
......@@ -73,14 +73,14 @@ bool setTextToPasteboard(std::string str)
PasteboardCreate( kPasteboardClipboard, &pasteboard );
err = PasteboardClear( pasteboard );
require_noerr( err, PasteboardClear_FAILED );
//require_noerr( err, PasteboardClear_FAILED );
CFDataRef data;
data = CFDataCreate(kCFAllocatorDefault, (UInt8*)byteArrayIndex, strlen(byteArrayIndex)+1);
err = PasteboardPutItemFlavor( pasteboard, (PasteboardItemID)1, kUTTypeUTF8PlainText, data, 0);
require_noerr( err, PasteboardPutItemFlavor_FAILED );
//require_noerr( err, PasteboardPutItemFlavor_FAILED );
PasteboardPutItemFlavor_FAILED:
PasteboardClear_FAILED:
......@@ -101,14 +101,14 @@ std::string getTextFromPasteboard()
err = badPasteboardSyncErr;
err = PasteboardGetItemCount( inPasteboard, &itemCount );
require_noerr( err, CantGetPasteboardItemCount );
//require_noerr( err, CantGetPasteboardItemCount );
for( int itemIndex = 1; itemIndex <= itemCount; itemIndex++ )
{
PasteboardItemID itemID;
CFDataRef flavorData;
err = PasteboardGetItemIdentifier( inPasteboard, itemIndex, &itemID );
require_noerr( err, CantGetPasteboardItemIdentifier );
//require_noerr( err, CantGetPasteboardItemIdentifier );
err = PasteboardCopyItemFlavorData( inPasteboard, itemID, CFSTR("public.utf8-plain-text"), &flavorData );
if(err==noErr)data = (char*)CFDataGetBytePtr(flavorData);
if( data!=NULL && err==noErr )
......
Examples/OldDrawGrid/main.cpp
View file @ d51a665d
......@@ -23,6 +23,7 @@
#include "tga.h"
#include "screenshot.h"
#include "volumetric.h"
#include "vector.h"
#include "input.h"
#include "picker.h"
#include "clipper.h"
......@@ -206,6 +207,7 @@ std::vector<face2gl> clip_boundary;
volumetric * CommonVolumetricView;
Vectors * CommonVectors = NULL;
......@@ -1294,6 +1296,9 @@ void draw_screen()
if( bndupdate ) CommonVolumetricView->camera(campos,interactive);
CommonVolumetricView->draw(interactive);
}
if( CommonVectors )
CommonVectors->Draw(interactive);
for(int k = 0; k < streamlines.size(); ++k)
......@@ -1504,6 +1509,11 @@ void draw_screen()
correct_input = true;
streamlines.clear();
glutPostRedisplay();
if( CommonVectors )
{
delete CommonVectors;
CommonVectors = NULL;
}
}
}
......@@ -1515,79 +1525,90 @@ void draw_screen()
visualization_type = NONE;
for (size_t q = 0; q < stype.size(); ++q)
stype[q] = tolower(stype[q]);
if (stype == "node") visualization_type = NODE;
else if (stype == "edge") visualization_type = EDGE;
else if (stype == "face") visualization_type = FACE;
else if (stype == "cell") visualization_type = CELL;
else if (stype == "eset") visualization_type = ESET;
if (visualization_type == NONE)
printf("unknown element type %s\n", typen);
if (stype == "scale")
{
double scale = atof(visualization_prompt + k + 1);
std::cout << "input scale: " << scale << std::endl;
if( CommonVectors )
CommonVectors->SetScale(scale);
correct_input = true;
glutPostRedisplay();
}
else
{
disp_e = InvalidElement();
bool is_number = true;
for (l = k + 1; l < slen; ++l)
if (!isdigit(visualization_prompt[l]))
is_number = false;
if (is_number)
if (stype == "node") visualization_type = NODE;
else if (stype == "edge") visualization_type = EDGE;
else if (stype == "face") visualization_type = FACE;
else if (stype == "cell") visualization_type = CELL;
else if (stype == "eset") visualization_type = ESET;
if (visualization_type == NONE)
printf("unknown element type %s\n", typen);
else
{
comp = atoi(visualization_prompt + k + 1);
visualization_prompt[k] = ':';
disp_e = InvalidElement();
bool is_number = true;
for (l = k + 1; l < slen; ++l)
if (!isdigit(visualization_prompt[l]))
is_number = false;
if (is_number)
{
comp = atoi(visualization_prompt + k + 1);
visualization_prompt[k] = ':';
correct_input = true;
correct_input = true;
if (mesh->isValidElement(visualization_type, comp))
{
printf("Display data for %s:%d\n", typen, comp);
disp_e = mesh->ElementByLocalID(visualization_type, comp);
if (mesh->isValidElement(visualization_type, comp))
{
printf("Display data for %s:%d\n", typen, comp);
disp_e = mesh->ElementByLocalID(visualization_type, comp);
}
else
printf("No valid element at %s:%d\n", typen, comp);
}
else
printf("No valid element at %s:%d\n", typen, comp);
}
else if (visualization_type == ESET)
{
std::string name = std::string(visualization_prompt + k + 1);
visualization_prompt[k] = ':';
correct_input = true;
disp_e = mesh->GetSet(name);
if (disp_e.isValid())
printf("Display data for %s:%d\n", typen, disp_e.LocalID());
else