GitLab

Fix for possibility of race condition in point-to-point MPI
communications.

Fixes for warnings produced by clang.

Including issue #15

Call MPI_Init if needed, fix RowEntryType creation

XML format now can use Include attribute in any XML tag to address
external files.

Added mechanism to name meshes and retrive meshes by name.

Added feature to store data of RemoteHandle type that allows to address
elements on another mesh. Loading this data type from files is still
awkward.

Fixes for GCC.

Moved functionality to operate with dense matrices as INMOST service.

Added possibility to exchange data of type DATA_VARIABLE in parallel.

Added possibility to include external content in xml format.

Moved overloaded operators for variables from namespace INMOST into
global scope to prevent possible ambiguities in compilers.

Added perturbation algorithm for BCGS solver.

correct link for wiki

add cdash link

BCGStab(L) solver: perturbation of r_tilde to avoid breakdown.
Possibility to annotate matrix.

Fixed element removal algorithm during modification.
Added features to RowMerger algorithm.
Changed reported number of iterations for BiCGStab(L)

Conflicts:
	solver.cpp

We should trim spaces from the end of database line,
otherwise file names may be illegal.

Fix a problem in internal file format reading with MPI introduced in
previous commit.

Improved automatic finalization of xml tags in debugging files when
execution is halted.
Fixed that internal file format may be read incorrectly.

Replace str.back() with *str.rbegin()

Comment out faulty unused code.
Ensure dynarray<T,64>::iterator is parsed as a type.

Conflicts:
	solver_bcgsl.hpp

Added 2-clause bsd license for cmake files requested in cmake script for
petsc.
Introduced cmake option for Mondriaan matrix partitioning package for
solvers.
Changed reading of solver's parameters database to fix uninitialized
access reported by dr.memory.
Fixed bug in svdnxn with static std::vector allocation.
Added features to OldDrawGrid example.
Added solutions to problems described in issue #13.

solver_bcgsl.hpp: jump crosses initialization of 'bool halt'

Fix introduced problem with installation script.

Fixed bug in auto-differentiation that would calculate incorrect weights
for derivatives in ad_val().
Adapted several geometrical and adjacency retrieval algorithms to handle
broken conformity of the grid during modification, more attention to the
problem is needed.
Added visual studio debugger helpers.
Fixed several issues with openmp support.
Added openmp parallelization of BiCGStab(L) solver.
Fixed issues that files overwritten with MPI_File* functionality may
contain previous information.
Fixed a bug in OctreeCutcell, added another example for it.
Fixed a bug in collective operations in mesh class.

Restored OctreeCutcell example;
Added FixEdgeOrder, CheckEdgeOrder algorithms to check of consistency of
2d elements;
Element::Connect now uses FixEdgeOrder for faces;
Automatic grid dimension detection for vtk;
Fixed bug that sets may contain invalid links to elements even after
ApplyModification;
Corrected condition estimator in ddpqiluc;
Switched off pseudoinverse in bicgstab(l) since svd algorithm is bad.

Fixed svd for bcgstab(l);
Transposed matvec;
Interfaces for collective operations for Mesh class.