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  • Kirill Terekhov
  • INMOST
  • Wiki
  • 0403 Compilation PETSc Linux

0403 Compilation PETSc Linux · Changes

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Created 0403-Compilation-PETSc-Linux (markdown) authored Jan 20, 2015 by Alexander Danilov's avatar Alexander Danilov
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0403-Compilation-PETSc-Linux.md 0 → 100644
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Compiling INMOST with PETSc on Linux
======
INMOST requires PETSc version 3.5.0 or higher.
## Compiling PETSc
PETSc installer can also install a lot of other dependencies for you.
The following instructions assume that MPI is already installed and functional. You can use option `--download-openmpi` to install Open MPI with PETSc.
These steps can take some time.
```
cd "$INMOST_ROOT"
wget http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/petsc-lite-3.5.2.tar.gz
tar zxf petsc-3.5.2.tar.gz
rm -f petsc-3.5.2.tar.gz
cd petsc-3.5.2
export PETSC_DIR="`pwd`"
export PETSC_ARCH=linux-gnu-debug
./configure --download-f2cblaslapack --with-mpi=1
make all
```
You may as well compile optimized version of PETSc for timing and production runs.
```
PETSC_ARCH=linux-gnu-opt ./configure --download-f2cblaslapack --with-mpi=1 --with-debugging=0 -CFLAGS="-O2" -CXXFLAGS="-O2"
make PETSC_ARCH=linux-gnu-opt all
```
Once you are ready to switch to optimized version run
```
export PETSC_ARCH=linux-gnu-opt
```
and reconfigure and recompile INMOST.
## Compiling INMOST with PETSc support
Make sure the environment variables `PETSC_DIR` and `PETSC_ARCH` are initialized correctly.
CMake will detect your PETSc installation if both variables are present.
```
cd "$INMOST_ROOT"
mkdir -p INMOST-build
cd INMOST-build
cmake -DUSE_SOLVER_PETSC=ON ../INMOST-master
```
Clone repository
  • 0100 Compilation
  • 0200 Compilation Windows
  • 0201 Obtain MSVC
  • 0202 Obtain MSMPI
  • 0203 Compilation INMOST Windows
  • 0204 Compilation ParMETIS Windows
  • 0205 Compilation Zoltan Windows
  • 0206 Compilation PETSc Windows
  • 0207 Compilation Trilinos Windows
  • 0400 Compilation Linux
  • 0401 Install MPI
  • 0402 Compilation INMOST Linux
  • 0403 Compilation PETSc Linux
  • 0404 Compilation Trilinos Linux
  • 0405 Compilation ParMETIS Linux
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